Hey Nicole,
Thanks for your reply.
I did not mention a duplication of the domain. I explained that a domain can only exist once in the system. For a subdomain to exist, the main domain needs to be set up in the domain manager. Therefore, there is only one CMS connected to the domain. No matter if you use the main domain or “just” the subdomain. Most modern website builders use this infrastructure.
And for your case, I see the issue if you want to have completely separate style settings. However, there have been cases, where users used correct code, the global design settings and CSS classes to realize that.
Actually, you describe “when” the design breaks. I understand that you build this on a separate page and then try to copy the code over to the legacy page? Am I correct?
Would you be able to provide us with the Website ID and screenshots/screencasts of the breaks and the copy? If you do not like to share it here, please open a ticket and copy the community post link as well, so I can connect these 
Our support is also in German, in case you prefer it.
Regarding the “special case”. Well, in the past 5 years we just had maybe four to five questions about this / reports about this issue (including yours). I am sorry to be so direct, but …
… but that is not standard practice in webdesign. It is correct, that subdomains are used to solve “technical challenges” like for shops, blogs, apps, or localized content etc.
While creating a completely visually distinct case study is a great idea, treating a subdomain as a totally disconnected visual canvas is actually counter to modern UX and security best practices. From a cybersecurity and user-trust perspective, suddenly changing design systems on a subdomain triggers immediate red flags for modern web users. Even domain registrars and cybersecurity organizations explicitly advise against big changes in the design on subdomain.
That is not the direct reason why Sitejet is set up like it is, but a good argument for how our system is designed.
About your specific question: If you send me a ticket with the details (as well as a screencast to see how you do it) I can ask my colleagues to give some hints and some ideas. But please be advised that we have a very limited support for code / third party code and the likes.
But I think, maybe I can help you better, when I see the project/websites
